ade4 - Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
Tools for multivariate data analysis. Several methods are provided for the analysis (i.e., ordination) of one-table (e.g., principal component analysis, correspondence analysis), two-table (e.g., coinertia analysis, redundancy analysis), three-table (e.g., RLQ analysis) and K-table (e.g., STATIS, multiple coinertia analysis). The philosophy of the package is described in Dray and Dufour (2007) <doi:10.18637/jss.v022.i04>.
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openblascpp
15.02 score 45 stars 286 dependents 5.5k scripts 55k downloads
adespatial - Multivariate Multiscale Spatial Analysis
Tools for the multiscale spatial analysis of multivariate data. Several methods are based on the use of a spatial weighting matrix and its eigenvector decomposition (Moran's Eigenvectors Maps, MEM). Several approaches are described in the review Dray et al (2012) <doi:10.1890/11-1183.1>.
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openblas
11.05 score 42 stars 2 dependents 756 scripts 7.4k downloadsadegraphics - An S4 Lattice-Based Package for the Representation of Multivariate Data
Graphical functionalities for the representation of multivariate data. It is a complete re-implementation of the functions available in the 'ade4' package.
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10.01 score 9 stars 6 dependents 444 scripts 7.1k downloadsadephylo - Exploratory Analyses for the Phylogenetic Comparative Method
Multivariate tools to analyze comparative data, i.e. a phylogeny and some traits measured for each taxa. The package contains functions to represent comparative data, compute phylogenetic proximities, perform multivariate analysis with phylogenetic constraints and test for the presence of phylogenetic autocorrelation. The package is described in Jombart et al (2010) <doi:10.1093/bioinformatics/btq292>.
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9.71 score 10 stars 4 dependents 584 scripts 7.4k downloadsade4TkGUI - 'ade4' Tcl/Tk Graphical User Interface
A Tcl/Tk GUI for some basic functions in the 'ade4' package.
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4.76 score 2 stars 14 scripts 4.1k downloads